|Organized and presented by||Johannes Köster, lead developer of Snakemake, founder of the Bioconda project|
|Date and Time||2021, Sep 21+22, 9am-1pm EDT|
|Location||Virtual, via Zoom|
The Snakemake workflow management system is a tool to create reproducible, scalable, transparent, and adaptable data analyses. Workflows are described via a human readable, Python based language. They can be seamlessly scaled to server, cluster, grid and cloud environments, without the need to modify the workflow definition. Finally, Snakemake workflows can entail a description of required software, which will be automatically deployed to any execution environment.
With over 300k downloads on Bioconda, and on average over 6 new citations per week (>1000 in total), Snakemake is a widely used and accepted standard for reproducible data science that has powered numerous high impact publications.
|2021, Sep 21|
|9.00am-9.30am||Presentation: Introduction to Snakemake|
|9.30am-1pm||Tutorial: Basic practical session|
|2021, Sep 22|
|9.00am-9.45am||Presentation: Advanced usage of Snakemake|
|9.45am-1pm||Tutorial: Advanced practical session|